Lifeboat Foundation

Open source has emerged as a powerful set of principles for solving complex problems in fields as diverse as education and physical security. With roughly 60 million Americans suffering from a chronic health condition, traditional research progressing slowly, and personalized medicine on the horizon, the time is right to apply open source to health research. Advances in technology enabling cheap, massive data collection combined with the emerging phenomena of self quantification and crowdsourcing make this plan feasible today. We can all work together to cure disease, and here’s how.

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Following is a discussion of two potential threats to humanity – one which has existed for eons, the second we have seen recently resurfacing having thought it had been laid to rest.

First, a recent story on PhysOrg describes the work researchers at Vanderbilt University have performed in isolating antibodies from elderly people who had survived the 1918 flu pandemic. This comes three years after researchers at Mount Sinai and the Armed Forces Institute of Pathology in Washington, D.C isolated the same virus which caused this outbreak from the frozen bodies of people in Alaska who had died in the pandemic.

In addition to being an impressive achievement of biomedical science, which involved isolating antibody-secreting B cells from donors and generating “immortalized” cell lines to produce large amounts of antibodies, this research also demonstrates the amazing memory the immune system has (90 years!), as well as the ability scientists have to use tissue samples from people born nearly a century ago and fashion them into a potential weapon against future similar outbreaks. Indeed, these manufactured antibodies proved effective against 1918 flu virus when tested in mice.

Continue reading “Threats to humanity – the old and the resurgent” »

Researchers have devised a rapid and efficient method for generating protein sentinels of the immune system, called monoclonal antibodies, which mark and neutralize foreign invaders.

For both ethical and practical reasons, monoclonals are usually made in mice. And that’s a problem, because the human immune system recognizes the mouse proteins as foreign and sometimes attacks them instead. The result can be an allergic reaction, and sometimes even death.

To get around that problem, researchers now “humanize” the antibodies, replacing some or all of mouse-derived pieces with human ones.

Wilson and Ahmed were interested in the immune response to vaccination. Conventional wisdom held that the B-cell response would be dominated by “memory” B cells. But as the study authors monitored individuals vaccinated against influenza, they found that a different population of B cells peaked about one week after vaccination, and then disappeared, before the memory cells kicked in. This population of cells, called antibody-secreting plasma cells (ASCs), is highly enriched for cells that target the vaccine, with vaccine-specific cells accounting for nearly 70 percent of all ASCs.

Continue reading “30 days to make antibodies to limit Pandemics” »

What is metabolomics?

Genes are similar to the plans for a house; they show what it looks like, but not what people are getting up to inside. One way of getting a snapshot of their lives would be to rummage through their rubbish, and that is pretty much what metabolomics does. […]

Metabolomics studies metabolites, the by-products of the hundreds of thousands of chemical reactions that continuously go on in every cell of the human body. Because blood and urine are packed with these compounds, it should be possible to detect and analyse them. If, say, a tumour was growing somewhere then, long before any existing methods can detect it, the combination of metabolites from the dividing cancer cells will produce a new pattern, different from that seen in healthy tissue. Such metabolic changes could be picked up by computer programs, adapted from those credit-card companies use to detect crime by spotting sudden and unusual spending patterns amid millions of ordinary transactions.

This could be used for traditional medicine, both to prevent pathologies and to detect those that are already present so they can be treated. But another use would be as part of an early-detection system to defend against pandemics and biological attacks. As mentioned previously, network-theory can help us better use vaccines. But once you have a cure or antidote, you also need to identify people that are already infected but haven’t died yet, and the earlier you can do that after the infection, the more chances they have to live.

Continue reading “Metabolomics Could be Part of a BioShield” »

If a pandemic strikes and hundreds of millions are at risk, we won’t have enough vaccines for everybody, at least not within the time window where vaccines would help. But a new strategy could help use the vaccines we have more effectively:

Researchers are now proposing a new strategy for targeting shots that could, at least in theory, stop a pandemic from spreading along the network of social interactions. Vaccinating selected people is essentially equivalent to cutting out nodes of the social network. As far as the pandemic is concerned, it’s as if those people no longer exist. The team’s idea is to single out people so that immunizing them breaks up the network into smaller parts of roughly equal sizes. Computer simulations show that this strategy could block a pandemic using 5 to 50 percent fewer doses than existing strategies, the researchers write in an upcoming Physical Review Letters.

So you break up the general social network into sub-networks, and then you target the most important nodes of these sub-networks and so on until you run out of vaccines. The challenge will be to get good information about social networks, something not quite as easy as mapping computer networks, but there is progress on that front.

Continue reading “Using Vaccines more Effectively to Stop Pandemics” »

There is a strong overlap between those concerned about extinction risk prevention and healthy life extension. Accordingly, many supporters of the Lifeboat Foundation will be attending an open event on regenerative medicine taking place on the UCLA campus on the 27th of June. Here is the blurb:

On Friday, June 27th, leading scientists and thinkers in stem cell research and regenerative medicine will gather in Los Angeles at UCLA for Aging 2008 to explain how their work can combat human aging, and the sociological implications of developing rejuvenation therapies. Aging 2008 is free, with advance registration required.

UCLA Royce Hall
Friday June 27th | Doors open 4pm
405 Hilgard Ave, Los Angeles, CA 90024

This special public event is being organized by the Methuselah Foundation. Dr. Aubrey de Grey, chairman and chief science officer of the Methuselah Foundation, said, “Our organization has raised over $10 million to crack open the logjams in longevity science. With the two-armed strategy of direct investments into key research projects, and a competitive prize to spur on competing scientists’ race to break rejuvenation and longevity records in lab mice, the Foundation is actively accelerating the drive toward a future free of age-related degeneration.” The Methuselah Foundation has been covered by “60 Minutes,” Popular Science, the Wall Street Journal, and other top-flight media outlets.

Continue reading “Aging 2008 -- an Open Event for Regenerative Medicine” »

The report, “Synthetic Biology: Social and Ethical Challenges”, highlights concerns about ownership, misuse, unintended consequences, and accidental release of synthetic organisms into the environment.

Andrew Balmer and Professor Paul Martin, the report’s authors, suggest a threat from “garage biology”, with people experimenting at home. They also emphasise that there is no policy on the impact of synthetic biology on international bioweapons conventions.

Read the entire report here (PDF).

Cross posted from Next big future by Brian Wang, Lifeboat foundation director of Research

I am presenting disruption events for humans and also for biospheres and planets and where I can correlating them with historical frequency and scale.

There has been previous work on categorizing and classifying extinction events. There is Bostroms paper and there is also the work by Jamais Cascio and Michael Anissimov on classification and identifying risks (presented below).

A recent article discusses the inevtiable “end of societies” (it refers to civilizations but it seems to be referring more to things like the end of the roman empire, which still ends up later with Italy, Austria Hungary etc… emerging)

Continue reading “Disruptions from small recessions to extinctions” »

IF civilisation is wiped out on Earth, salvation may come from space. Plans are being drawn up for a “Doomsday ark” on the moon containing the essentials of life and civilisation, to be activated in the event of earth being devastated by a giant asteroid or nuclear war.

Construction of a lunar information bank, discussed at a conference in Strasbourg last month, would provide survivors on Earth with a remote-access toolkit to rebuild the human race.

A basic version of the ark would contain hard discs holding information such as DNA sequences and instructions for metal smelting or planting crops. It would be buried in a vault just under the lunar surface and transmitters would send the data to heavily protected receivers on earth. If no receivers survived, the ark would continue transmitting the information until new ones could be built.

Continue reading “Mankind's secrets kept in lunar ark” »